High Performance Computing (HPC) Systems Administrator

Job ID: 1143901_RR00105297

Facility: NYU Grossman School of Medicine

Position Type: Full-Time/Regular

Shift: Day

Schedule: 9am-5pm

Department: IT/Health IT/Informatics, MCIT-Research-HPC (S1812)NYU Grossman School of Medicine

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NYU Grossman School of Medicine is one of the nation’s top-ranked medical schools. For 175 years, NYU Grossman School of Medicine has trained thousands of physicians and scientists who have helped to shape the course of medical history and enrich the lives of countless people. An integral part of NYU Langone Health, the Grossman School of Medicine at its core is committed to improving the human condition through medical education, scientific research, and direct patient care. At NYU Langone Health, equity and inclusion are fundamental values. We strive to be a place where our exceptionally talented faculty, staff, and students of all identities can thrive. We embrace inclusion and individual skills, ideas, and knowledge.

For more information, go to med.nyu.edu, and interact with us on LinkedIn, Glassdoor, Indeed, Facebook, Twitter and Instagram.

Position Summary:
We have an exciting opportunity to join our team as a High Performance Computing (HPC) Systems Administrator.

In this role, the High Performance Computing (HPC) Systems Administrator will leverage technical expertise to collaborate with the HPC team, scientists, and software engineers in supporting the computational needs of world-class researchers in both clinical and basic science at NYU Langone Health (NYULH). Reporting to the Director of the NYULH HPC Facility, the Systems Administrator will work closely with facility staff, principal investigators, research labs, core facilities, individual scientists, and students.
Primary responsibilities include system administration, system monitoring, troubleshooting, software maintenance, installations, and optimization of advanced computing systems and related infrastructure.

Job Responsibilities:

  • Deploy, administer, and monitor Linux-based HPC clusters and petascale storage systems. 
  • Install, maintain, and upgrade scientific software, libraries, and licensed applications. 
  • Troubleshoot and resolve system, hardware, and application issues across HPC environments. 
  • Develop and maintain scripts for system administration, monitoring, reporting, and data pipeline optimization. 
  • Provide technical support to researchers; assist with project execution, benchmarking, and resource planning. 
  • Research, deploy, and optimize resource management and scheduling systems (e.g., batch systems). 
  • Evaluate and manage a helpdesk ticketing system; ensure timely resolution of user-submitted issues. 
  • Integrate HPC systems with laboratory equipment such as DNA sequencers, mass spectrometers, and Cryo-Electron Microscopes. 
  • Implement and manage HPC security infrastructure; ensure compliance with PHI handling policies and best practices. 
  • Create and maintain technical documentation and user guides. 
  • Develop and deliver training sessions and workshops on HPC usage and best practices. 
  • Consult with researchers to assess computational needs and prepare resource planning reports. 
  • Support grant proposal development with technical specifications for computational infrastructure. 

Minimum Qualifications:
To qualify you must have a Bachelor’s degree in Computer Science, Engineering, Physics, Bioinformatics, or a related field (or equivalent experience).
3+ years of experience administering Linux systems, HPC clusters, and large-scale storage solutions.
Proficiency in scripting languages such as Bash, Python, or Perl for system administration and automation.
Experience with job scheduling systems (e.g., Slurm, PBS, LSF) and resource management tools.
Strong troubleshooting skills across system, hardware, network, and application layers.
Familiarity with scientific software installation, configuration, and maintenance.
Knowledge of security best practices, including the handling of Protected Health Information (PHI) in research environments.
Excellent communication and documentation skills; ability to support and train non-expert users.

Preferred Qualifications:
Experience supporting research computing in biomedical or clinical environments.
Familiarity with data transfer optimization tools (e.g., Globus, Aspera) and parallel file systems (e.g., GPFS, Lustre, BeeGFS).
Experience integrating HPC resources with laboratory instruments (e.g., DNA sequencers, mass spectrometers, microscopes).
Experience developing and delivering technical training, tutorials, or workshops.
Knowledge of grant writing processes and preparing computational resource justifications.
Experience with containerization technologies (e.g., Singularity, Docker) in HPC environments.

Qualified candidates must be able to effectively communicate with all levels of the organization.

NYU Grossman School of Medicine provides its staff with far more than just a place to work. Rather, we are an institution you can be proud of, an institution where you’ll feel good about devoting your time and your talents. At NYU Langone Health, we are committed to supporting our workforce and their loved ones with a comprehensive benefits and wellness package. Our offerings provide a robust support system for any stage of life, whether it’s developing your career, starting a family, or saving for retirement. The support employees receive goes beyond a standard benefit offering, where employees have access to financial security benefits, a generous time-off program and employee resources groups for peer support. Additionally, all employees have access to our holistic employee wellness program, which focuses on seven key areas of well-being: physical, mental, nutritional, sleep, social, financial, and preventive care. The benefits and wellness package is designed to allow you to focus on what truly matters. Join us and experience the extensive resources and services designed to enhance your overall quality of life for you and your family.

NYU Grossman School of Medicine is an equal opportunity employer and committed to inclusion in all aspects of recruiting and employment. All qualified individuals are encouraged to apply and will receive consideration. We require applications to be completed online.

View NYU Grossman School of Medicine’s Equal Employment Opportunity (EEO) policy. Know Your Rights: Workplace discrimination is illegal.

NYU Langone Health provides a salary range to comply with the New York state Law on Salary Transparency in Job Advertisements. The salary range for the role is $81,325.15 – $135,541.73 Annually. Actual salaries depend on a variety of factors, including experience, specialty, education, and hospital need. The salary range or contractual rate listed does not include bonuses/incentive, differential pay or other forms of compensation or benefits.

To view the Pay Transparency Notice, please click here

Salaries shown on independent jobs related websites reflect market averages and do not represent information obtained directly from NYU Langone. We invite and encourage each candidate to discuss salary/hourly specifics during the application and hiring process.

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Be Where Everyone Is Dedicated to Exceptional Care

NYU Langone is a world-class, patient-centered, integrated academic health system with Magnet®-recognized status by the American Nurses Credentialing Center (ANCC). Our trifold mission to care, teach, and discover is achieved daily through NYU Langone’s inclusive culture devoted to excellence across the organization. Here, you can advance your career supported by exceptionally talented faculty and staff in an environment where everyone works together to deliver the best possible outcomes for our patients.

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Joining Our Team

Get ready to start your career journey at NYU Langone, where cutting-edge research meets compassionate care, and discover how you can contribute to shaping the future of medicine.

Step 1

Apply Online

The NYU Langone hiring process begins with you applying through our online portal. Be sure to update and upload your resume. Shortly after you submit your application, you will receive an email confirmation. Ten days after applying you will receive a talent assessment to be completed.

Step 2

Schedule Interviews

If selected to continue the interview process, HR will reach out via phone or email first. Then, depending on your position, they will schedule an interview with unit managers or team members. You are encouraged to dress professionally for all interviews.

Step 3

Receive Offer

If you successfully complete the interview process and are identified as a finalist for the position, we will require that you complete a professional reference process. After evaluating the completed references, a decision will be made on who will receive a preliminary offer. If you receive a preliminary offer, HR will start the onboarding process with an agreed-upon tentative start date.

Step 4

Training & Orientation

You will be contacted by an onboarding specialist who will work with you on your pre-boarding requirements. Once fully cleared, we will ask you to complete compliance orientation regulatory training. On your first day, you will attend an online required orientation to acclimate to the health system and report to your new department based on instructions provided by your hiring manager.

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Frequently Asked Questions

We offer different employment options to fit every schedule and talent area of interest. These options include full time, part time, per diem, internship, and temporary.
We are growing rapidly and are always looking for exceptional people to join our organization. New positions are posted to our careers site daily.
We update our job postings daily.
All applications should be submitted by clicking the “Apply for This Position” button on any job listing.
To search and apply for our available temporary opportunities, use the Job Search function, which is accessible on the home page and other careers site pages. NYU Langone has various temporary opportunities, including our In-House Temporary Staffing Program. The Program is designed to place highly skilled individuals in temporary assignments throughout NYU Langone to help our departments meet their commitment to quality patient care, research, and operations. These individuals are temporary employees within NYU Langone and adhere to all NYU Langone policies and guidelines.
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Current employees can check application status on the Steps for Success Career Portal .